PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_6AL_46B659A23.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 280aa    MW: 29147.5 Da    PI: 6.8697
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_6AL_46B659A23.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1254.3e-081842202663
                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            +e+eeL++kv eL+a N +L++el +lk+ ++++++e+
  Traes_6AL_46B659A23.2 184 QECEELAQKVSELTAANGTLRSELGQLKD-CKTMETEN 220
                            89*************************86.66666665 PP

Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MYHHPAAAYY AHAHASMVAG VPYMAGESVS AAGKGKRVGK TRCVPSGEIN FSSGSGDAGS  60
QGSLEKGDTG ANQKGSSSSA KRRKSGAANT EDGLSVITNH NSWIQGESQA ATVQNAVTEP  120
PLEDKERSTS KLLVLAPGRA ALTSAAPNLN IGMDPLSASP SSIVQGEVNA AASSQSNASL  180
SQMQECEELA QKVSELTAAN GTLRSELGQL KDCKTMETEN KQLMQSEGPS VVTTLSIQVE  240
APEPHPDRSP RLPVVEHLLP QTSEKMCTNG CLVAGYSKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-122HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010227971.12e-53PREDICTED: DNA-binding protein EMBP-1-like
SwissprotP250323e-99EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLW5G6P90.0W5G6P9_WHEAT; Uncharacterized protein
STRINGMLOC_79342.22e-80(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]